BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C04LP1|AL425826
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1015 814 0.0
3x_Contig1745 578 e-165
3x_Contig54 560 e-159
3x_Contig1806 490 e-138
>3x_Contig1015
Length = 4152
Score = 814 bits (410), Expect = 0.0
Identities = 426/430 (99%), Gaps = 2/430 (0%)
Strand = Plus / Plus
Query: 365 aactatgacaatgttcttagataaggcaccttgtagaacggcttacccaagtcaggcaag 424
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 14 aactatgacaatgttcttagataaggc-ccttgtagaacggcttacccaagtcaggcaag 72
Query: 425 acgtcagacatcaccatgtgctgtctatcctctacattgactttatccgctgaagaagag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 acgtcagacatcaccatgtgctgtctatcctctacattgactttatccgctgaagaagag 132
Query: 485 tcagcgatctcatattttactgtgtcagaaactgaatcactcgacatgtttcaaaaaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 tcagcgatctcatattttactgtgtcagaaactgaatcactcgacatgtttcaaaaaaaa 192
Query: 545 ttgttatcaggtacacgacactattgtrataattctaataccgttctcaatggtttttat 604
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 193 ttgttatcaggtacacgacactattgtaataattctaataccgttctcaatggtttttat 252
Query: 605 tggtattgaaaatgaaccctattaattaaagaatgtatgaraactacaactaaaatcatt 664
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 253 tggtattgaaaatgaaccctattaattaaagaatgtatgaaaactacaactaaaatcatt 312
Query: 665 cggcaaataaggaagtacatgctctcacttggacccttttatattaaac-ttttcggaaa 723
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 313 cggcaaataaggaagtacatgctctcacttggacccttttatattaaactttttcggaaa 372
Query: 724 tatcaacgtaacacaccaaagaaaaatgcaaaactgggggatgttggcgtcagagctaaa 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tatcaacgtaacacaccaaagaaaaatgcaaaactgggggatgttggcgtcagagctaaa 432
Query: 784 tttttattgc 793
||||||||||
Sbjct: 433 tttttattgc 442
>3x_Contig1745
Length = 19830
Score = 578 bits (291), Expect = e-165
Identities = 450/503 (89%)
Strand = Plus / Minus
Query: 29 atacgtgaagcaacaaacataccgaacacgtccttcttgtcataatcctctggtaaacca 88
|||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||
Sbjct: 4136 atacgtgaagcaacaaacataccgaagacgtcttttttgtcatagtcctctggtaaacca 4077
Query: 89 ttgatccatgcaccagatactgcttggatgaggacaccaatgcaaatcaagacattaccc 148
|||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 4076 ttgatccatgtaccagataatgcttggatgaggacaccaatgcaaatcaaaacattacct 4017
Query: 149 acgtacatcccgaccttacggccatacttgtcaatgacatatggtgcaaattggaagcac 208
|| ||||| ||||| ||||| |||||||||||||||| |||||||||| |||||| |
Sbjct: 4016 acatacattccgactttacgaccatacttgtcaatgatgtatggtgcaagttggaataat 3957
Query: 209 aaaagcataccaaacatcataccgttggagataacacccaactctgcaccgttaggatta 268
| |||||||||||||| |||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 3956 ataagcataccaaacaccataccattagagataacacccaactctgcaccatttggatta 3897
Query: 269 cccatcgcgtttagatagtctggcatagcatacaacccgttcaagagagaaccatcataa 328
||||||||||| || || || ||||||||||||||||||||||||||||||||||| |||
Sbjct: 3896 cccatcgcgttgaggtaatccggcatagcatacaacccgttcaagagagaaccatcgtaa 3837
Query: 329 ccaaggttcgtagaggatagcgataaaccaaaaatgaactatgacaatgttcttagataa 388
|||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||||
Sbjct: 3836 ccaaggttcgtagaggatagggataaaccaacaacgaacaatgacaatgttcttagataa 3777
Query: 389 ggcaccttgtagaacggcttacccaagtcaggcaagacgtcagacatcaccatgtgctgt 448
|||||||||||||| |||||||||||||||||||||||||| ||||| | |||||| |||
Sbjct: 3776 ggcaccttgtagaatggcttacccaagtcaggcaagacgtcggacattatcatgtgatgt 3717
Query: 449 ctatcctctacattgactttatccgctgaagaagagtcagcgatctcatattttactgtg 508
||||| ||| |||||| ||| || || ||| |||| ||||||| ||||||||| | |
Sbjct: 3716 ctatcatctgcattgattttgtctgccgaacaagaatcagcgacttcatattttgcattt 3657
Query: 509 tcagaaactgaatcactcgacat 531
||||||||||||||||| |||||
Sbjct: 3656 tcagaaactgaatcacttgacat 3634
>3x_Contig54
Length = 317
Score = 560 bits (282), Expect = e-159
Identities = 295/298 (98%), Gaps = 1/298 (0%)
Strand = Plus / Minus
Query: 5 aacaaaactccggtacccaacacgatacgtgaagcaacaaacataccgaacacgtccttc 64
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aacaaaacaccggtacccaacacgatacgtgaagcaacaaacataccgaacacgtccttc 246
Query: 65 ttgtcataatcctctggtaaaccattgatccatgcaccagatactgcttggatgaggaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttgtcataatcctctggtaaaccattgatccatgcaccagatactgcttggatgaggaca 186
Query: 125 ccaatgcaaatcaagacattacccacgtacatcccgaccttacggccatacttgtcaatg 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 185 ccaatgcaaatcaagacattacccacgtacatcccga-cttacggccatacttgtcaatg 127
Query: 185 acatatggtgcaaattggaagcacaaaagcataccaaacatcataccgttggagataaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acatatggtgcaaattggaagcacaaaagcataccaaacatcataccgttggagataaca 67
Query: 245 cccaactctgcaccgttaggattacccatcgcgtttagatagtctggcatagcataca 302
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 66 cccaactctgcaccgttaggattacccatcgcgtttagatagtctgtcatagcataca 9
>3x_Contig1806
Length = 53694
Score = 490 bits (247), Expect = e-138
Identities = 439/503 (87%)
Strand = Plus / Plus
Query: 29 atacgtgaagcaacaaacataccgaacacgtccttcttgtcataatcctctggtaaacca 88
|||||||||||||||||||||||||| ||||| || ||||||| ||||| |||||||||
Sbjct: 47680 atacgtgaagcaacaaacataccgaagacgtcttttctgtcatagtcctcaggtaaacca 47739
Query: 89 ttgatccatgcaccagatactgcttggatgaggacaccaatgcaaatcaagacattaccc 148
|||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 47740 ttgatccatgtaccagacaatgcttggatgaggacaccaatgcaaatcaagacattaccg 47799
Query: 149 acgtacatcccgaccttacggccatacttgtcaatgacatatggtgcaaattggaagcac 208
|| |||||||||||||| || |||||||||||||||| ||||||||| ||||||
Sbjct: 47800 acatacatcccgacctttcgaccatacttgtcaatgatgaatggtgcaagttggaatagt 47859
Query: 209 aaaagcataccaaacatcataccgttggagataacacccaactctgcaccgttaggatta 268
| |||||||||||||| |||||| || ||||||||||||||||||||||| || ||||||
Sbjct: 47860 ataagcataccaaacaccataccattagagataacacccaactctgcaccattgggatta 47919
Query: 269 cccatcgcgtttagatagtctggcatagcatacaacccgttcaagagagaaccatcataa 328
|||||||| || || || || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 47920 cccatcgcattgaggtaatccggcatagcatacaatccgttcaagagagaaccatcgtaa 47979
Query: 329 ccaaggttcgtagaggatagcgataaaccaaaaatgaactatgacaatgttcttagataa 388
|||||||| |||||||| || ||||| |||| |||||| |||||| ||||||||||||
Sbjct: 47980 ccaaggtttgtagaggagagggataagccaacgatgaaccatgacagtgttcttagatag 48039
Query: 389 ggcaccttgtagaacggcttacccaagtcaggcaagacgtcagacatcaccatgtgctgt 448
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 48040 ggcaccttgtagaatggcttacccaagtcaggcaagacatcagacatcaccatgtgatac 48099
Query: 449 ctatcctctacattgactttatccgctgaagaagagtcagcgatctcatattttactgtg 508
|| || ||| || ||||||| || |||||| |||| |||| ||| | || ||| || ||
Sbjct: 48100 ctttcatctgcactgactttgtctgctgaacaagaatcagtgattttattctttgctttg 48159
Query: 509 tcagaaactgaatcactcgacat 531
||||||||||||||| |||||||
Sbjct: 48160 tcagaaactgaatcagtcgacat 48182
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5466
Number of Sequences: 1807
Number of extensions: 5466
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 4
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)